zScoreThrethold: calculate local background cutoff value
In InPAS: InPAS: a bioconductor package for the identification of novel alternative PolyAdenylation Sites (PAS) using RNA-seq data
Description
Usage
Arguments
Value
Author(s)
View source: R/zScoreThrethold.R
Description
calculate local background cutoff value based on z-score
Usage
1
zScoreThrethold(background, introns, totalCov, utr3, z = 2)
Arguments
background
background range
introns
GRanges of introns
totalCov
total coverage of output of totalCoverage
utr3
output of utr3Annotation
z
z score cut off value
Value
a numeric vector
Author(s)
Jianhong Ou
InPAS documentation built on Nov. 8, 2020, 5:03 p.m.
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Description Usage Arguments Value Author(s)
View source: R/zScoreThrethold.R
Description
calculate local background cutoff value based on z-score
Usage
1 | zScoreThrethold(background, introns, totalCov, utr3, z = 2)
|
Arguments
background |
background range |
introns |
GRanges of introns |
totalCov |
total coverage of output of totalCoverage |
utr3 |
output of utr3Annotation |
z |
z score cut off value |
Value
a numeric vector
Author(s)
Jianhong Ou
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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