totalCoverage: total coverage
In InPAS: InPAS: a bioconductor package for the identification of novel alternative PolyAdenylation Sites (PAS) using RNA-seq data
Description
Usage
Arguments
Value
Author(s)
View source: R/totalCoverage.R
Description
for huge dataset, it will read in the coverage from tmp files and merge them by groups
Usage
1
totalCoverage(coverage, genome, hugeData, groupList=NULL)
Arguments
coverage
coverage for each sample, outputs of
coverageFromBedGraph
genome
an object of BSgenome
hugeData
hugeData or not
groupList
tag names involved in each groups
Value
a coverage list
Author(s)
Jianhong Ou
InPAS documentation built on Nov. 8, 2020, 5:03 p.m.
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Description Usage Arguments Value Author(s)
View source: R/totalCoverage.R
Description
for huge dataset, it will read in the coverage from tmp files and merge them by groups
Usage
1 | totalCoverage(coverage, genome, hugeData, groupList=NULL)
|
Arguments
coverage |
coverage for each sample, outputs of coverageFromBedGraph |
genome |
an object of BSgenome |
hugeData |
hugeData or not |
groupList |
tag names involved in each groups |
Value
a coverage list
Author(s)
Jianhong Ou
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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