optimalSegmentation: calculate SSE
In InPAS: InPAS: a bioconductor package for the identification of novel alternative PolyAdenylation Sites (PAS) using RNA-seq data
Description
Usage
Arguments
Value
Author(s)
View source: R/optimalSegmentation.R
Description
calculate SSE values
Usage
1
optimalSegmentation(.ele, search_point_START, search_point_END, n = 1, savedID = NA)
Arguments
.ele
3UTR coverage
search_point_START
start position to calculate
search_point_END
end position to calculate
n
the length of output
savedID
the proximal CPsites for noval distal events
Value
a list of SSE and idx
Author(s)
Jianhong Ou
InPAS documentation built on Nov. 8, 2020, 5:03 p.m.
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Description Usage Arguments Value Author(s)
View source: R/optimalSegmentation.R
Description
calculate SSE values
Usage
1 | optimalSegmentation(.ele, search_point_START, search_point_END, n = 1, savedID = NA)
|
Arguments
.ele |
3UTR coverage |
search_point_START |
start position to calculate |
search_point_END |
end position to calculate |
n |
the length of output |
savedID |
the proximal CPsites for noval distal events |
Value
a list of SSE and idx
Author(s)
Jianhong Ou
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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