singleSampleAnalyze: do analysis for single sample
In InPAS: InPAS: a bioconductor package for the identification of novel alternative PolyAdenylation Sites (PAS) using RNA-seq data
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
View source: R/singleSampleAnalyze.R
Description
do analysis for single sample by a hidden Markov model
Usage
1
singleSampleAnalyze(UTR3eset)
Arguments
UTR3eset
must be the output of getUTR3eSet
Details
the test will be performed by a two states hidden Markov model.
Value
a metrix of test results
Author(s)
Jianhong Ou
See Also
Examples
1
2
3
path <- file.path(find.package("InPAS"), "extdata")
load(file.path(path, "eset.MAQC.rda"))
res <- singleSampleAnalyze(eset)
InPAS documentation built on Nov. 8, 2020, 5:03 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
View source: R/singleSampleAnalyze.R
Description
do analysis for single sample by a hidden Markov model
Usage
1 | singleSampleAnalyze(UTR3eset)
|
Arguments
UTR3eset |
must be the output of |
Details
the test will be performed by a two states hidden Markov model.
Value
a metrix of test results
Author(s)
Jianhong Ou
See Also
Examples
1 2 3 | path <- file.path(find.package("InPAS"), "extdata")
load(file.path(path, "eset.MAQC.rda"))
res <- singleSampleAnalyze(eset)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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