dot-process_affy: Process Affy
In RGLab/HIPCMatrix: Microarray and RNA-seq Processing for ImmuneSpace
.process_affy R Documentation
Process Affy
Description
Process Affy
Usage
.process_affy(input_files, verbose = FALSE)
Arguments
input_files
input file names
verbose
print verbose logging statements?
Details
Requires annotation packages which can be installed from bioconductor.
affy::justRMA() will use the appropriate package.
Two are customCDF packages loaded from inst/FeatureAnnotationSetDev: huex10stv2cdf
and hursta2a520709cdf
Value
background-corrected data.table of probe intensities
RGLab/HIPCMatrix documentation built on Jan. 29, 2023, 5:13 a.m.
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| .process_affy | R Documentation |
Process Affy
Description
Process Affy
Usage
.process_affy(input_files, verbose = FALSE)
Arguments
input_files |
input file names |
verbose |
print verbose logging statements? |
Details
Requires annotation packages which can be installed from bioconductor.
affy::justRMA() will use the appropriate package.
Two are customCDF packages loaded from inst/FeatureAnnotationSetDev: huex10stv2cdf
and hursta2a520709cdf
Value
background-corrected data.table of probe intensities
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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