suppa_transform: Imports SUPPA2 output from a given path and transforms it...
In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations
suppa_transform R Documentation
Imports SUPPA2 output from a given path and transforms it into standardized
junction format. Results from one patients should be stored per folder. Please note
that alternative first exons (AF) and alternative last exons (AL) are not supported.
Description
GitHub: https://github.com/comprna/SUPPA
Paper: https://doi.org/10.1186/s13059-018-1417-1
Usage
suppa_transform(path)
Arguments
path
The path to a folder with SUPPA2 output
Value
A tibble in standardized junction format, combining all alternative
splicing classes that are covered by SUPPA2
TRON-Bioinformatics/splice2neo documentation built on July 27, 2024, 3:25 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| suppa_transform | R Documentation |
Imports SUPPA2 output from a given path and transforms it into standardized junction format. Results from one patients should be stored per folder. Please note that alternative first exons (AF) and alternative last exons (AL) are not supported.
Description
GitHub: https://github.com/comprna/SUPPA
Paper: https://doi.org/10.1186/s13059-018-1417-1
Usage
suppa_transform(path)
Arguments
path |
The path to a folder with SUPPA2 output |
Value
A tibble in standardized junction format, combining all alternative splicing classes that are covered by SUPPA2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.