stringtie_transform: Imports StringTie assembled transcripts and transforms the...
In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations
View source: R/parse_stringtie.R
stringtie_transform R Documentation
Imports StringTie assembled transcripts and transforms the raw output
into standardized junction output format
Description
GitHub: https://github.com/gpertea/stringtie
Paper: https://doi.org/10.1038/nbt.3122
Usage
stringtie_transform(gtf.file)
Arguments
gtf.file
The path to StringTie GTF file
Value
A tibble in standardized junction format
TRON-Bioinformatics/splice2neo documentation built on July 27, 2024, 3:25 a.m.
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View source: R/parse_stringtie.R
| stringtie_transform | R Documentation |
Imports StringTie assembled transcripts and transforms the raw output into standardized junction output format
Description
GitHub: https://github.com/gpertea/stringtie
Paper: https://doi.org/10.1038/nbt.3122
Usage
stringtie_transform(gtf.file)
Arguments
gtf.file |
The path to StringTie GTF file |
Value
A tibble in standardized junction format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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