calcDistArma: Compute Euclidean distance matrix by rows
In IMB-Computational-Genomics-Lab/scGPS: A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation)

Compute Euclidean distance matrix by rows

1	calcDistArma(x)

`x`	A numeric matrix

a distance matrix

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mat_test <-matrix(rnbinom(1000,mu=0.01, size=10),nrow=1000)
#library(microbenchmark)
#microbenchmark(calcDistArma(mat_test), dist(mat_test), times=3)

IMB-Computational-Genomics-Lab/scGPS documentation built on Dec. 6, 2020, 3:20 p.m.

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