fusion_spanning_reads_count: Get the spanning reads count from a Fusion object

In stianlagstad/chimeraviz: Visualization tools for gene fusions

Get the spanning reads count from a Fusion object

Description

This getter retrieves the spanning reads count from a Fusion object

Usage

fusion_spanning_reads_count(x)

## S4 method for signature 'Fusion'
fusion_spanning_reads_count(x)

Arguments

x	The Fusion object you wish to retrieve the spanning reads count for.

Value

The Fusion spanning reads count.

Examples

# Load data
defuseData <- system.file(
  "extdata",
  "defuse_833ke_results.filtered.tsv",
  package="chimeraviz")
fusions <- import_defuse(defuseData, "hg19", 1)
fusion <- fusions[[1]]
# Get the spanning reads count
fusion_spanning_reads_count(fusion)

stianlagstad/chimeraviz documentation built on Dec. 3, 2023, 8:11 p.m.