QCsample-methods: Retrieve sample objects associated with an experiment

In shengqh/ChIPQC: Quality metrics for ChIPseq data

Retrieve sample objects associated with an experiment

Description

Retrieves a list of ChIPQCsample objects, or one specific ChIPQCsample object, from a ChIPQCexperiment object.

Methods

signature(object = "ChIPQCexperiment", sampleID)

If sampleID is missing or equal to 0, the full list of ChIPQCsample objects is returned. If sampleID is an integer n, the ChIPQCsample object corresponding to the nth sample is returned. If sampleID is a character string, the ChIPQCsample object corresponding to the sample with that ID is returned.

Author(s)

Rory Stark and Thomas Carroll

See Also

ChIPQC-package, ChIPQCsample, ChIPQCexperiment

Examples

data(example_QCexperiment)
samples = QCsample(exampleExp)
length(samples)
names(samples)
samples$CTCF_1

shengqh/ChIPQC documentation built on Feb. 27, 2023, 10:51 p.m.