dat: In vitro temporal data of human neural progenitor cells and...
In saralinker/brainImageR: A Framework for visualizing gene set enrichment throughout neurodevelopment
Description
RNA-seq data: Induced pluripotent stem cells were differentiated
into neural progenitor cells (NPC.1, NPC.2, NPC.3, NPC.4) that were patterned
for the forebrain lineage. Neurons were differentiated from
these neural progenitor cells (Neurons.5, Neurons.6).
RNA was collected from both NPCs and neurons,
poly(A) cDNA libraries were generated, and sequenced
on an Illumina HiSeq 2500.
RNA-seq data was aligned to the human Hg19 reference, and counts were
normalized into log2(TPM + 1) values. Gene names are in human symbol format.
Usage
1
Format
10193 X 6 data.frame
saralinker/brainImageR documentation built on May 29, 2019, 1:51 p.m.
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Description
RNA-seq data: Induced pluripotent stem cells were differentiated into neural progenitor cells (NPC.1, NPC.2, NPC.3, NPC.4) that were patterned for the forebrain lineage. Neurons were differentiated from these neural progenitor cells (Neurons.5, Neurons.6). RNA was collected from both NPCs and neurons, poly(A) cDNA libraries were generated, and sequenced on an Illumina HiSeq 2500. RNA-seq data was aligned to the human Hg19 reference, and counts were normalized into log2(TPM + 1) values. Gene names are in human symbol format.
Usage
1 |
Format
10193 X 6 data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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