subsetCount: Subset count method for ExperimentSubset objects

In campbio/ExperimentSubset: Manages subsets of data with Bioconductor Experiment objects

Description

Get the total count of the available subsets (excluding subset assays) in an ExperimentSubset object.

Usage

subsetCount(x)

## S4 method for signature 'SubsetRangedSummarizedExperiment'
subsetCount(x)

## S4 method for signature 'SubsetSingleCellExperiment'
subsetCount(x)

## S4 method for signature 'SubsetSummarizedExperiment'
subsetCount(x)

## S4 method for signature 'SubsetSpatialExperiment'
subsetCount(x)

## S4 method for signature 'SubsetTreeSummarizedExperiment'
subsetCount(x)

Arguments

x	ExperimentSubset Input ExperimentSubset object.

Value

A numeric value representing the total count of the subsets.

Examples

data(sce_chcl, package = "scds")
es <- ExperimentSubset(sce_chcl)
es <- createSubset(es,
"subset1",
rows = c(10,11,50,56,98,99,102,105,109, 200),
cols = c(20,21,40,45,90,99,100,123,166,299),
parentAssay = "counts")
subsetCount(es)

campbio/ExperimentSubset documentation built on Sept. 10, 2021, 3:09 p.m.