plotSeuratDot: Create Dot Plots for Markers from check_marker

In easybio: Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit

Create Dot Plots for Markers from check_marker

Description

This function generates dot plots for the markers obtained from the check_marker function for specified cluster groups within a Seurat object. The plots are saved to a temporary directory.

Usage

plotSeuratDot(srt, cls, ...)

Arguments

srt	A Seurat object containing the single-cell data.
cls	A list containing cluster groups to check. Each element of the list should correspond to a cluster or a group of clusters for which to generate dot plots.
...	Additional parameters to pass to the check_marker function.

Value

The function returns the temporary directory invisibly.

easybio documentation built on Sept. 17, 2024, 1:08 a.m.