plotPossibleCell: Plot Possible Cell Distribution Based on matchCellMarker2()...
In easybio: Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit
plotPossibleCell R Documentation
Plot Possible Cell Distribution Based on matchCellMarker2() Results
Description
This function creates a dot plot to visualize the distribution of possible cell types
based on the results from the matchCellMarker2() function, utilizing data from the CellMarker2.0 database.
Usage
plotPossibleCell(marker, min.uniqueN = 2)
Arguments
marker
data.table, the result from the matchCellMarker2() function.
min.uniqueN
integer, the minimum number of unique marker genes that must be matched for a cell type to be included in the plot. Default is 2.
Value
A ggplot2 object representing the distribution of possible cell types.
easybio documentation built on Sept. 17, 2024, 1:08 a.m.
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| plotPossibleCell | R Documentation |
Plot Possible Cell Distribution Based on matchCellMarker2() Results
Description
This function creates a dot plot to visualize the distribution of possible cell types
based on the results from the matchCellMarker2() function, utilizing data from the CellMarker2.0 database.
Usage
plotPossibleCell(marker, min.uniqueN = 2)
Arguments
marker |
data.table, the result from the |
min.uniqueN |
integer, the minimum number of unique marker genes that must be matched for a cell type to be included in the plot. Default is 2. |
Value
A ggplot2 object representing the distribution of possible cell types.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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