removeLowQualityProbes: Quality control of SnpSetIllumina objects
In beadarraySNP: Normalization and reporting of Illumina SNP bead arrays
Description
Usage
Arguments
Details
Value
Author(s)
View source: R/SnpSetIlluminaQC.R
Description
Remove probes form a SnpSetIllumina object that show a low quality throughout
the experiment
Usage
1
removeLowQualityProbes(object, cutoff = 0.25)
Arguments
object
SnpSetIllumina object
cutoff
numeric
Details
Probes that have a median value below cutoff * median value for the
whole experiment are deleted from the object.
Value
SnpSetIllumina object
Author(s)
Jan Oosting
beadarraySNP documentation built on Nov. 8, 2020, 7:21 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s)
View source: R/SnpSetIlluminaQC.R
Description
Remove probes form a SnpSetIllumina object that show a low quality throughout the experiment
Usage
1 | removeLowQualityProbes(object, cutoff = 0.25)
|
Arguments
object |
SnpSetIllumina object |
cutoff |
numeric |
Details
Probes that have a median value below cutoff * median value for the
whole experiment are deleted from the object.
Value
SnpSetIllumina object
Author(s)
Jan Oosting
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.