Description Objects from the Class Slots Extends Methods Note Author(s) References See Also Examples
The SnpSetSegments class is a direct descendant of the SnpSetIllumina class, with an extra slot to define the genomic segments in each sample.
Objects can be created by calls of the form new("SnpSetSegments", assayData, phenoData, experimentData, annotation, protocolData, call, callProbability, G, R, cn.segments, featureData, extraData, ...)
.
cn.segments
:Object of class "list"
assayData
:Object of class "AssayData"
see "SnpSetIllumina"
phenoData
:Object of class "AnnotatedDataFrame"
see "SnpSetIllumina"
featureData
:Object of class "AnnotatedDataFrame"
see "SnpSetIllumina"
experimentData
:Object of class "MIAME"
see "SnpSetIllumina"
annotation
:Object of class "character"
see "SnpSetIllumina"
protocolData
:Object of class "AnnotatedDataFrame"
see "SnpSetIllumina"
.__classVersion__
:Object of class "Versions"
"VersionedBiobase"
Class "SnpSetIllumina"
, directly.
Class "eSet"
, by class "SnpSetIllumina", distance 2.
Class "VersionedBiobase"
, by class "SnpSetIllumina", distance 3.
Class "Versioned"
, by class "SnpSetIllumina", distance 4.
signature(object = "SnpSetSegments")
: ...
signature(object = "SnpSetSegments", value = "list")
: ...
signature(.Object = "SnpSetSegments")
: ...
This class is under development, and not usable in the current form
Jan Oosting
Corver et.al. Can Res dec 2008
1 | showClass("SnpSetSegments")
|
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