d_zibb_3: Simulated Ig gene usage data

In snaketron/IgGeneUsage: Differential gene usage in immune repertoires

Simulated Ig gene usage data

Description

A small example dataset that has the following features:

• 3 conditions

• 5 samples per condition

• 8 Ig genes

This dataset was simulated from zero-inflated beta-binomial (ZIBB) distribution. Simulation code is available in inst/scripts/d_zibb_3.R

Usage

data("d_zibb_3", package = "IgGeneUsage")

Format

A data frame with columns:

• "individual_id"

• "condition"

• "gene_name"

• "gene_name_count"

This format is accepted by IgGeneUsage.

Source

Simulation code is provided in inst/scripts/d_zibb_3.R

Examples

data("d_zibb_3", package = "IgGeneUsage")
head(d_zibb_3)

snaketron/IgGeneUsage documentation built on April 23, 2024, 2:22 a.m.