IgGeneUsage-package: The R package IgGeneUsage

In snaketron/IgGeneUsage: Differential gene usage in immune repertoires

The R package IgGeneUsage

Description

IgGeneUsage detects aberrant immunoglobulin (Ig) gene usage between adaptive immune repertoires that belong to different biological conditions using a probabilistic model which is analyzed computationally by Bayes inference.

Details

This package contains functions for:

1. differential Ig gene usage analysis (function DGU)

2. posterior predictive checks (part of results generated by function DGU)

3. leave-one-out cross validation (function LOO)

Author(s)

Authors and maintainers:

• Simo Kitanovski [e-mail] (ORCID)

See Also

Useful links:

• https://github.com/snaketron/IgGeneUsage

• Report bugs at https://github.com/snaketron/IgGeneUsage/issues

snaketron/IgGeneUsage documentation built on April 23, 2024, 2:22 a.m.