getPloidy: Calculation of ploidy status
In macintyrelab/CNpare: Comparing tumour copy number profiles
View source: R/quantifydiff_functions.R
getPloidy R Documentation
Calculation of ploidy status
Description
This function calculate the overall ploidy of samples by computing
the weighted mean copy number values of all segments
Usage
getPloidy(events)
Arguments
events
dataframe with segments of the sample
Value
ploidy status of the sample
Examples
exp_cell=cells_segcn[cells_segcn$sample=="22RV1",]
ploidy<-getPloidy(exp_cell)
macintyrelab/CNpare documentation built on April 15, 2022, 4:46 a.m.
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View source: R/quantifydiff_functions.R
| getPloidy | R Documentation |
Calculation of ploidy status
Description
This function calculate the overall ploidy of samples by computing the weighted mean copy number values of all segments
Usage
getPloidy(events)
Arguments
events |
dataframe with segments of the sample |
Value
ploidy status of the sample
Examples
exp_cell=cells_segcn[cells_segcn$sample=="22RV1",] ploidy<-getPloidy(exp_cell)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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