getChangepointCN: Get difference in copy number between adjacent segments
In macintyrelab/CNpare: Comparing tumour copy number profiles
View source: R/cnsignature_functions.R
getChangepointCN R Documentation
Get difference in copy number between adjacent segments
Description
Helper function for extractCopynumberFeatures.
Approach developed by Geoff Macintyre et al. 2018
Usage
getChangepointCN(abs_profiles)
Arguments
abs_profiles
absolute copy-number profiles
Value
Matrix with difference in copy number between adjacent segments
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
changepoint<-getChangepointCN(profiles)
macintyrelab/CNpare documentation built on April 15, 2022, 4:46 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/cnsignature_functions.R
| getChangepointCN | R Documentation |
Get difference in copy number between adjacent segments
Description
Helper function for extractCopynumberFeatures. Approach developed by Geoff Macintyre et al. 2018
Usage
getChangepointCN(abs_profiles)
Arguments
abs_profiles |
absolute copy-number profiles |
Value
Matrix with difference in copy number between adjacent segments
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
changepoint<-getChangepointCN(profiles)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.