extractCopynumberFeatures: Extract features of copy number profiles
In macintyrelab/CNpare: Comparing tumour copy number profiles
View source: R/cnsignature_functions.R
extractCopynumberFeatures R Documentation
Extract features of copy number profiles
Description
This function extract feactures of CNAs.
Approach developed by Geoff Macintyre et al. 2018
Usage
extractCopynumberFeatures(CN_data, cores = 1)
Arguments
CN_data
segment table with copy numbers
cores
cores to use. Default is 1
Value
A list with features per sample
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
CN_features<-extractCopynumberFeatures(profiles)
macintyrelab/CNpare documentation built on April 15, 2022, 4:46 a.m.
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View source: R/cnsignature_functions.R
| extractCopynumberFeatures | R Documentation |
Extract features of copy number profiles
Description
This function extract feactures of CNAs. Approach developed by Geoff Macintyre et al. 2018
Usage
extractCopynumberFeatures(CN_data, cores = 1)
Arguments
CN_data |
segment table with copy numbers |
cores |
cores to use. Default is 1 |
Value
A list with features per sample
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
CN_features<-extractCopynumberFeatures(profiles)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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