pureClipGlobalFilterPlot: Plot the PureCLIP score distribution with global cutoff...

In ZarnackGroup/BindingSiteFinder: Binding site defintion based on iCLIP data

Plot the PureCLIP score distribution with global cutoff indicator

Description

A diagnostic function that plots the PureCLIP score distribution on a log2 scale. The function pureClipGlobalFilter is expected to be executed prior to calling this plot function.

Usage

pureClipGlobalFilterPlot(object)

Arguments

object

a BSFDataSet object

Value

a plot of type ggplot

See Also

pureClipGlobalFilter

Examples

# load data
files <- system.file("extdata", package="BindingSiteFinder")
load(list.files(files, pattern = ".rda$", full.names = TRUE))
# apply 5% filter
bds = pureClipGlobalFilter(object = bds, cutoff = 0.05)
pureClipGlobalFilterPlot(bds)

ZarnackGroup/BindingSiteFinder documentation built on May 31, 2024, 3:29 a.m.