R/data.R

In JordanVeldboom/compartmap: A/B compartment inference from ATAC-seq and methylation array data

#' Example ATAC-seq data for compartmap
#' 
#' This data was generated using the data from the reference via bwa mem
#' and pre-processing the data using the ATACseeker package.
#' 
#' @name filtered.data.chr14
#' @docType data
#' @author Benjamin K Johnson \email{ben.johnson@vai.org}
#' @references \url{https://trace.ncbi.nlm.nih.gov/Traces/sra/?study=SRP082417}
#' @keywords data
#' @usage data(bulkATAC_raw_filtered_chr14, package = "compartmap")
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#' Example Illumina 450k methylation array data for compartmap
#' 
#' This data was generated using the data from the reference via the
#' sesamize function from the SeSAMe package.
#' 
#' @name array.data.chr14
#' @docType data
#' @author Benjamin K Johnson \email{ben.johnson@vai.org}
#' @references \url{https://f1000research.com/articles/5-1281/v3}
#' @keywords data
#' @usage data(meth_array_450k_chr14, package = "compartmap")
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