samtoolsView: Calls the samtools 'view' command
In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
Description
Usage
Arguments
Author(s)
Description
Calls the samtools 'view' command.
Usage
1
2
## Default S3 method:
samtoolsView(pathname, pathnameD, ..., verbose=FALSE)
Arguments
pathname
A SAM/BAM file.
pathnameD
The destination pathname.
...
Additional arguments specifying samtools 'view' switches
passed to systemSamtools().
verbose
See Verbose.
Author(s)
Henrik Bengtsson
HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.
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Description Usage Arguments Author(s)
Description
Calls the samtools 'view' command.
Usage
1 2 | ## Default S3 method:
samtoolsView(pathname, pathnameD, ..., verbose=FALSE)
|
Arguments
pathname |
A SAM/BAM file. |
pathnameD |
The destination pathname. |
... |
Additional arguments specifying samtools 'view' switches
passed to |
verbose |
See |
Author(s)
Henrik Bengtsson
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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