SequenceContigsInterface: The SequenceContigsInterface class
In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
Description
Usage
Arguments
Methods
Author(s)
Description
Package: aroma.seq
Class SequenceContigsInterface
Interface
~~|
~~+--SequenceContigsInterface
Directly known subclasses:
BamDataFile, Bowtie2IndexSet, BwaIndexSet, FastaReferenceFile, FastaReferenceIndexFile, GcBaseFile, GtfDataFile
public abstract class SequenceContigsInterface
extends Interface
An Interface for methods for with sequence contigs.
Usage
1
Arguments
...
Not used.
Methods
Methods:
getSeqLengths -
getSeqNames -
getTotalSeqLength -
hasSeqLengths -
nbrOfSeqs -
Methods inherited from Interface:
extend, print, uses
Author(s)
Henrik Bengtsson
HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.
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Description Usage Arguments Methods Author(s)
Description
Package: aroma.seq
Class SequenceContigsInterface
Interface
~~|
~~+--SequenceContigsInterface
Directly known subclasses:
BamDataFile, Bowtie2IndexSet, BwaIndexSet, FastaReferenceFile, FastaReferenceIndexFile, GcBaseFile, GtfDataFile
public abstract class SequenceContigsInterface
extends Interface
An Interface for methods for with sequence contigs.
Usage
1 |
Arguments
... |
Not used. |
Methods
Methods:
getSeqLengths | - | |
getSeqNames | - | |
getTotalSeqLength | - | |
hasSeqLengths | - | |
nbrOfSeqs | - | |
Methods inherited from Interface:
extend, print, uses
Author(s)
Henrik Bengtsson
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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