scran_modelGeneVar: scran_modelGeneVar Generates and stores variability data from...
In singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/scran_modelGeneVar.R
Description
scran_modelGeneVar
Generates and stores variability data from scran::modelGeneVar in the input singleCellExperiment object
Usage
1
scran_modelGeneVar(inSCE, assayName)
Arguments
inSCE
a singleCellExperiment object
assayName
selected assay to compute variable features from
Value
inSCE updated singleCellExperiment object that contains variable feature metrics in rowData
Author(s)
Irzam Sarfraz
Examples
1
2
data(sce_chcl, package = "scds")
sce_chcl <- scran_modelGeneVar(sce_chcl, "counts")
singleCellTK documentation built on Nov. 8, 2020, 5:21 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/scran_modelGeneVar.R
Description
scran_modelGeneVar Generates and stores variability data from scran::modelGeneVar in the input singleCellExperiment object
Usage
1 | scran_modelGeneVar(inSCE, assayName)
|
Arguments
inSCE |
a singleCellExperiment object |
assayName |
selected assay to compute variable features from |
Value
inSCE updated singleCellExperiment object that contains variable feature metrics in rowData
Author(s)
Irzam Sarfraz
Examples
1 2 | data(sce_chcl, package = "scds")
sce_chcl <- scran_modelGeneVar(sce_chcl, "counts")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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