sceBatches: Example Single Cell RNA-Seq data in SingleCellExperiment...
In singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
Description
Two batches of pancreas scRNAseq dataset are combined with their original
counts. Cell types and batches are annotated in 'colData(sceBatches)'.
Two batches came from Wang, et al., 2016, annotated as ''w''; and Xin, et
al., 2016, annotated as ''x'‘. Two common cell types, '’alpha'' and
''beta'', that could be found in both original studies with relatively
large population were kept for cleaner demonstration.
data('sceBatches')
Usage
1
Format
An object of class SingleCellExperiment with 100 rows and 250 columns.
singleCellTK documentation built on Nov. 8, 2020, 5:21 p.m.
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Description
Two batches of pancreas scRNAseq dataset are combined with their original counts. Cell types and batches are annotated in 'colData(sceBatches)'. Two batches came from Wang, et al., 2016, annotated as ''w''; and Xin, et al., 2016, annotated as ''x'‘. Two common cell types, '’alpha'' and ''beta'', that could be found in both original studies with relatively large population were kept for cleaner demonstration. data('sceBatches')
Usage
1 |
Format
An object of class SingleCellExperiment with 100 rows and 250 columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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