msigdb_table: MSigDB gene get Cctegory table
In singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
Description
Usage
Format
Examples
Description
A table of gene set categories that can be download from MSigDB. The
categories and descriptions can be found here:
https://www.gsea-msigdb.org/gsea/msigdb/collections.jsp. The IDs in the
first column can be used to retrieve the gene sets for these categories
using the importGeneSetsFromMSigDB function.
Usage
1
Format
A data.frame.
Examples
1
data("msigdb_table")
singleCellTK documentation built on Nov. 8, 2020, 5:21 p.m.
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Description Usage Format Examples
Description
A table of gene set categories that can be download from MSigDB. The categories and descriptions can be found here: https://www.gsea-msigdb.org/gsea/msigdb/collections.jsp. The IDs in the first column can be used to retrieve the gene sets for these categories using the importGeneSetsFromMSigDB function.
Usage
1 |
Format
A data.frame.
Examples
1 | data("msigdb_table")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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