rnb.plot.num.sites.covg: rnb.plot.num.sites.covg

Description Usage Arguments Value Author(s)

View source: R/controlPlotsBiSeq.R

Description

plot the number of sites vs median and other percentiles of coverage

Usage

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rnb.plot.num.sites.covg(
  rnbs,
  addSampleNames = (length(samples(rnbs)) < 100),
  bar.percentiles = c(0.25, 0.75)
)

Arguments

rnbs

RnBiseqSet object

addSampleNames

should the sample names be added to the plot

bar.percentiles

the percentiles to be used for the error bars. Must be a vector of length 2 of which the first two elements will be used

Value

plot as an object of type ggplot

Author(s)

Fabian Mueller


RnBeads documentation built on March 3, 2021, 2 a.m.