The values of options in RnBeads are stored in dedicated R objects accompanying the package. These objects are named
infos
, accepted
, current
and previous
. They should not be loaded or otherwise operated on
by users. Please refer to the documentation of rnb.options
for accessing and modifying option values in
RnBeads.
infos
is a data.frame
containing information about all options in RnBeads. Row names in
this table are the option names; the column names are "Type"
, "Named"
, "Null"
,
"Max"
, "Min"
, "MaxInclusive"
and "MinInclusive"
.
accepted
is a list
containing the sets of accepted values for some of the options.
current
is a list
with current values for all options.
previous
is a list
with previous values for the affected options; this list is only temporarily
used while setting option values through rnb.options
or rnb.xml2options
.
Yassen Assenov
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