rnb.load.annotation.from.db: rnb.load.annotation.from.db

In RnBeads: RnBeads

Description

Loads a previously region annotation from the RnBeads resource database

Usage

rnb.load.annotation.from.db(types, assembly = "hg19")

Arguments

types	One-element character vector giving the name of the region annotation. If this annotation is already available, it will be overwritten for the current session.
assembly	Genome assembly of interest. See rnb.get.assemblies for the list of supported genomes.

Details

This function checks whether a region annotation is present in the RnBeads resources, downloads the corresponding annotation file(s) from the and then runs rnb.load.annotation to import the annotation.

Value

Invisibly, TRUE if the annotation was loaded successfully; an error message if the objects in the given file do not encode an annotation.

Author(s)

Fabian Mueller

See Also

rnb.load.annotation for loading annotation from a binary file

Examples

rnb.region.types() 
rnb.load.annotation.from.db(c("tiling1kb", "dynamicMethZiller2013"))
rnb.region.types()

RnBeads documentation built on March 3, 2021, 2 a.m.