rnb.execute.filter.summary: rnb.execute.filter.summary
In RnBeads: RnBeads

Description Usage Arguments Details Value Author(s) See Also

Calculates a table summarizing the effect of the applied filtering procedures.

1	rnb.execute.filter.summary(old.set, new.set)

`old.set`	Methylation dataset before filtering as an object of type inheriting `RnBSet`.
`new.set`	Methylation dataset after filtering as an object of type inheriting `RnBSet`.

This function expects that the sites and samples in new.set are subsets of the sites and samples in old.set, respectively. If this is not the case, it exists with an error.

matrix summarizing the number of removed and retained sites, samples, and (optionally) reliable and unreliable measurements.

Yassen Assenov

rnb.run.preprocessing for running the whole preprocessing module

RnBeads documentation built on March 3, 2021, 2 a.m.