Description Usage Arguments Details Value Author(s)
Concatenates two array-based datasets focusing on the common probes.
1 | rnb.combine.arrays(dataset1, dataset2, type = "common")
|
dataset1 |
First input dataset as an object of type inheriting |
dataset2 |
Second input dataset as an object of type inheriting |
type |
Type of the combine operation as a character singleton, one of "common", "all.x", "all.y" and "all". |
This method expects that the sample annotation tables of the two datasets have identical structures.
This method expects that the two datasets target the same genome assembly.
The platform of the combined dataset is the most recent among the platforms of the input datasets.
The combined dataset is of type RnBeadRawSet
only when both input
datasets are of this type. Otherwise, any intensity value data is ignored.
Only the common probes are included in the resulting dataset.
Regions summarized in any of the input datasets are ignored. In the resulting dataset, regions are
summarized as specified in the analysis option "region.types"
.
QC data in the input datasets is ignored. The combined dataset includes no data on QC probe intensities.
Inferred covariates in the input datasets are ignored. The combined dataset includes no data on inferred covariates.
The combined dataset stores big tables on disk when the analysis option
"disk.dump.big.matrices"
is enabled.
Combined dataset as an object of type inheriting RnBeadSet
.
Yassen Assenov
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