plot_agg_regions_sample_grouped: Plot aggregate regions with grouped samples

Description Usage Arguments Value

View source: R/plot_agg_regions.R

Description

Plot aggregate regions with grouped samples

Usage

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plot_agg_regions_sample_grouped(
  x,
  regions,
  flank = 2000,
  stranded = TRUE,
  span = 0.05
)

Arguments

x

the NanoMethResult object.

regions

a table of regions or GRanges, or a list of such objects. The table of regions must contain chr, start and end columns.

flank

the number of flanking bases to add to each side of each region.

stranded

TRUE if negative strand features should have coordinates flipped to reflect features like transcription start sites.

span

the span for loess smoothing.

Value

a ggplot plot object.


NanoMethViz documentation built on Nov. 8, 2020, 4:51 p.m.