get_gene_list-methods: description of function get_gene_list

In stela2502/StefansExpressionSet: StefansExpressionSet

description of function get_gene_list

Description

Query all stat tables and select genes based on multiple p value cutoff values

Usage

get_gene_list(x, p_value = c(0.1, 0.01, 0.001, 1e-04, 1e-05, 1e-06, 1e-07,
  1e-08), geneNameCol = NULL)

Arguments

x	the StefansExpressionSet
p_value	a list of p value cut offs (0.1, 1e-2 ,1e-3,1e-4,1e-5, 1e-6, 1e-7, 1e-8 )
geneNameCol	the (optional) annotation column defining the gene names

Value

the StefansExpressionSet object with values in the sig_genes slot

stela2502/StefansExpressionSet documentation built on April 24, 2023, 8:15 p.m.