corMat-methods: description of function corMat
In stela2502/StefansExpressionSet: StefansExpressionSet
corMat R Documentation
description of function corMat
Description
calculate a correlation matrix for the data object
Usage
corMat(x, sd_cut = 1, method = "spearman", geneNameCol = "gene_name",
groupCol = NULL, name = "tmp")
Arguments
x
the StefansExpressionSet varibale
sd_cut
the cut off value for the sd check
method
any method supported by cor.test
geneNameCol
the name of the gene column (gene_name)
groupCol
the column name of the grouping variable in the samples table
name
the name of the analysis
Value
the correlation matrix
stela2502/StefansExpressionSet documentation built on April 24, 2023, 8:15 p.m.
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| corMat | R Documentation |
description of function corMat
Description
calculate a correlation matrix for the data object
Usage
corMat(x, sd_cut = 1, method = "spearman", geneNameCol = "gene_name",
groupCol = NULL, name = "tmp")
Arguments
x |
the StefansExpressionSet varibale |
sd_cut |
the cut off value for the sd check |
method |
any method supported by |
geneNameCol |
the name of the gene column (gene_name) |
groupCol |
the column name of the grouping variable in the samples table |
name |
the name of the analysis |
Value
the correlation matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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