SingleCellsNGS-methods: description of function SingleCellsNGS

SingleCellsNGSR Documentation

description of function SingleCellsNGS

Description

create a new SingleCellsNGS object This object is mainly used for plotting the

data

Usage

SingleCellsNGS(dat, Samples, name = "WorkingSet", namecol = "GroupName",
  namerow = "GeneID", outpath = "")

Arguments

dat

data frame or matrix containing all expression data

Samples

A sample description table

name

The name of this object is going to be used in the output of all plots and tables - make it specific

namecol

The samples table column that contains the (to be set) names of the samples in the data matrix

namerow

This is the name of the gene level annotation column in the dat file to use as ID

outpath

Where to store the output from the analysis

Value

A new SingleCellsNGS object


stela2502/StefansExpressionSet documentation built on April 24, 2023, 8:15 p.m.