SingleCellsNGS | R Documentation |
create a new SingleCellsNGS object This object is mainly used for plotting the
data
SingleCellsNGS(dat, Samples, name = "WorkingSet", namecol = "GroupName",
namerow = "GeneID", outpath = "")
dat |
data frame or matrix containing all expression data |
Samples |
A sample description table |
name |
The name of this object is going to be used in the output of all plots and tables - make it specific |
namecol |
The samples table column that contains the (to be set) names of the samples in the data matrix |
namerow |
This is the name of the gene level annotation column in the dat file to use as ID |
outpath |
Where to store the output from the analysis |
A new SingleCellsNGS object
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