sample_annotationdata: sample_annotationdata
In ruggleslab/blackSheepR: Outlier Analysis for pairwise differential comparison
sample_annotationdata R Documentation
sample_annotationdata
Description
Example annotation data for Outlier analysis.
This example data is a subset of the data used in the CPTAC3 Breast Cancer
exploration study: (doi: 10.1038/nature18003).
Each row corresponds to a sample and each column is an binary annotation for
that sample.
Usage
sample_annotationdata
Format
A data frame with 76 rows and 6 variables:
- PAM50_Her2
The binary PAM50 Her2 classification for each sample
- PAM50_Basal
The binary PAM50 Basal classification for each sample
- PAM50_LumA
The binary PAM50 LumA classification for each sample
- PAM50_LumB
The binary PAM50 LumB classification for each sample
- ER_Status
The ER Status classification for each sample
- PR_Status
The PR Status classification for each sample
...
Source
ruggleslab/blackSheepR documentation built on Feb. 27, 2023, 10:39 p.m.
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| sample_annotationdata | R Documentation |
sample_annotationdata
Description
Example annotation data for Outlier analysis. This example data is a subset of the data used in the CPTAC3 Breast Cancer exploration study: (doi: 10.1038/nature18003). Each row corresponds to a sample and each column is an binary annotation for that sample.
Usage
sample_annotationdata
Format
A data frame with 76 rows and 6 variables:
- PAM50_Her2
The binary PAM50 Her2 classification for each sample
- PAM50_Basal
The binary PAM50 Basal classification for each sample
- PAM50_LumA
The binary PAM50 LumA classification for each sample
- PAM50_LumB
The binary PAM50 LumB classification for each sample
- ER_Status
The ER Status classification for each sample
- PR_Status
The PR Status classification for each sample
...
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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