Converse_GeneIDSymbol: ID change

In jiang-junyao/IReNA: IReNA

ID change

Description

Function to transfer Symbol ID to ENSEMBEL or ENSEMBEL to Symbol

Usage

Converse_GeneIDSymbol(Gene1, GeneInf1 = NULL, Spec1 = "")

Arguments

Gene1	vector, indicating original gene ids
GeneInf1	data.frame, correspondence file of gene ID, row names should be ENSEMBLE ID, first column should be Symbol ID, if GeneInf1 = NULL this function will be built-in corresponding gene ID file.
Spec1	If you don’t have a gene ID corresponding file, you can also use our built-in corresponding gene ID file, 'Mm' for mus musculus

Value

return a data.frame contain original gene ids and conversed gene ids

Examples

load(system.file("extdata", "test_clustering.rda", package = "IReNA"))

Converse_GeneIDSymbol(rownames(test_clustering), Spec1 = 'Hs')

jiang-junyao/IReNA documentation built on Nov. 4, 2024, 8:29 p.m.