aptamers: Sequence data for the Somalogic SOMAscan assay
In graumannlab/readat: Functionality to Read and Manipulate SomaLogic ADAT files

Sequence data for the SOMAmers in the 1129 and 1310 panels of the Somalogic SOMAscan assay.

A data frame with the following columns.

AptamerId: Character, primary key. The identifier of the aptamer sequence identified using SELEX. It consists of an SomaLogic SeqId truncated at the underscore, to remove its sequence version number.
SomaId: Character. The SomaLogic identifier for the protein target. For the 1129 and 1310 assays, there is a one-to-one correspondence between SeqId and SomaId, but in theory there is a many-to-one correspondence.
Target: Character. The name of the protein target, from the protein standard supplier, sometimes with additional annotation by SomaLogic.
TargetFullName: Character. The name of the protein target, from UniProt.
UniProt: List of character vectors. UniProt IDs for the protein target.
EntrezGeneID: List of character vectors. Entrez Gene IDs for the gene associated with protein target.
EntrezGeneSymbol: List of character vectors. Entrez Gene symbols for the gene associated with protein target.
Organism: Either "Human" or the name of a virus.
Units: Should always be RFU, short for Relative Fluorescence Units.
Type: The protein standard source for the original SELEX performed for the sequence. "Protein" refers to human protein; a few sequences used rat protein standard sources in the SELEX.
PlasmaDilution: What dilution factor is used in plasma?
SerumDilution: What dilution factor is used in serum?
IsIn1129Panel: Is the aptamer in the 1129 panel of the SOMAscan assay?
IsIn1310Panel: Is the aptamer in the 1310 panel of the SOMAscan assay?