assoc2list: Reorganize associations table in a list
In alussana/AffiXcan: A Functional Approach To Impute Genetically Regulated Expression
Description
Usage
Arguments
Value
Examples
Description
Reorganize associations table in a list
Usage
1
assoc2list(gene, regionAssoc)
Arguments
gene
A string; the name of an expressed gene
regionAssoc
A data.frame with the associations between regulatory
regions and expressed genes, and with colnames = c("REGULATORY_REGION",
"EXPRESSED_REGION")
Value
A list of data frames, each of which has the same structure of the
param regionAssoc, except that contains the information relative to one
expressed gene
Examples
1
2
3
4
5
6
if (interactive()) {
data(regionAssoc)
expressedRegions <- as.list(as.vector(unique(regionAssoc$EXPRESSED_REGION)))
gene <- expressedRegions[[1]]
assocList <- assoc2list(gene, regionAssoc)
}
alussana/AffiXcan documentation built on Oct. 20, 2020, 12:08 a.m.
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Description Usage Arguments Value Examples
Description
Reorganize associations table in a list
Usage
1 | assoc2list(gene, regionAssoc)
|
Arguments
gene |
A string; the name of an expressed gene |
regionAssoc |
A data.frame with the associations between regulatory regions and expressed genes, and with colnames = c("REGULATORY_REGION", "EXPRESSED_REGION") |
Value
A list of data frames, each of which has the same structure of the param regionAssoc, except that contains the information relative to one expressed gene
Examples
1 2 3 4 5 6 | if (interactive()) {
data(regionAssoc)
expressedRegions <- as.list(as.vector(unique(regionAssoc$EXPRESSED_REGION)))
gene <- expressedRegions[[1]]
assocList <- assoc2list(gene, regionAssoc)
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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