plot_1prot: Plot trends for a single protien

In YuliyaLab/ProteoMM: Multi-Dataset Model-based Differential Expression Proteomics Analysis Platform

Plot trends for a single protien

Description

Plot peptide trends for a protein

Usage

plot_1prot(
  mm,
  prot.info,
  prot_to_plot,
  prot_to_plot_col,
  gene_name,
  gene_name_col,
  colors,
  mylabs
)

Arguments

mm	matrix of raw intensities
prot.info	metadata for the intensities in mm
prot_to_plot	protein ID to plot
prot_to_plot_col	protein ID column index
gene_name	gene ID to plot
gene_name_col	gene ID to plot column index
colors	what colors to plot peptide abundances as, most commonly should be treatment groups
mylabs	sample labels to be plotted on x-axis

Value

Nil

YuliyaLab/ProteoMM documentation built on April 19, 2022, 8:12 a.m.