makeViolin: Posterior mean allelic ratio estimates in violin plots
In Wancen/airpart: Differential cell-type-specific allelic imbalance
makeViolin R Documentation
Posterior mean allelic ratio estimates in violin plots
Description
Posterior mean allelic ratio estimates in violin plots
Usage
makeViolin(sce, xlab = "cell type", ylim = c(0, 1))
Arguments
sce
SingleCellExperiment
xlab
the x axis name.
ylim
the y axis range
Value
a ggplot2 object, n represents number of cells in that cell type.
Examples
sce <- makeSimulatedData()
sce <- preprocess(sce)
sce <- geneCluster(sce, G = 1:4)
sce_sub <- wilcoxExt(sce, genecluster = 1)
sce_sub <- allelicRatio(sce_sub)
makeViolin(sce_sub)
Wancen/airpart documentation built on March 12, 2023, 11:53 a.m.
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| makeViolin | R Documentation |
Posterior mean allelic ratio estimates in violin plots
Description
Posterior mean allelic ratio estimates in violin plots
Usage
makeViolin(sce, xlab = "cell type", ylim = c(0, 1))
Arguments
sce |
SingleCellExperiment |
xlab |
the x axis name. |
ylim |
the y axis range |
Value
a ggplot2 object, n represents number of cells in that cell type.
Examples
sce <- makeSimulatedData() sce <- preprocess(sce) sce <- geneCluster(sce, G = 1:4) sce_sub <- wilcoxExt(sce, genecluster = 1) sce_sub <- allelicRatio(sce_sub) makeViolin(sce_sub)
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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