.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/helper_CCI.R
R/helper_bulk_expression.R
R/helper_celltype_expression.R
R/helper_pathway.R
R/helper_proportion.R
R/helper_spatial_metrics.R
R/run_scfeatures.R
R/utils.R
R/wrapper_run_scfeatures.R
README.md
_pkgdown.yml
data/example_scrnaseq.RData
data/scfeatures_result.RData
docs/404.html
docs/articles/index.html
docs/articles/scFeatures_associationstudy.html
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inst/CITATION
inst/extdata/figure/CCI_example_figures.png
inst/extdata/figure/aggregatedgene_example_figures.png
inst/extdata/figure/celltypegene_example_figures.png
inst/extdata/figure/celltypeproportion_example_figures.png
inst/extdata/figure/pathway_example_figures.png
inst/extdata/figure/spatial_example_figures.png
inst/extdata/output_report.Rmd
inst/overview.png
inst/script/example_scrnaseq
inst/sticker.png
man/example_scrnaseq.Rd
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man/run_association_study_report.Rd
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man/run_gene_cor.Rd
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man/scFeatures.Rd
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vignettes/.gitignore
vignettes/scFeatures_overview.Rmd