plotTopGenesBoxplot: plotTopGenesBoxplot

In IMB-Computational-Genomics-Lab/ascend: ascend - Analysis of Single Cell Expression, Normalisation, and Differential expression

Description

Generates a boxplot using geom_boxplot of the most expressed genes in the dataset, in a range defined by the user.

Usage

plotTopGenesBoxplot(object, n = 20, controls = TRUE)

Arguments

object	A EMSet.
n	Number of genes to be plotted.
controls	Include control genes in plot (Default: TRUE).

Value

A ggplot glob containing a box scatter plot that represents the expression of the most highly expressed genes

Examples

# Load EMSet
EMSet <- ascend::raw_set

# Plot top gene expression
top_genes <- plotTopGenesBoxplot(EMSet, n = 20, controls = FALSE)

IMB-Computational-Genomics-Lab/ascend documentation built on Aug. 29, 2019, 4:10 a.m.