import_gff: Import Annotations from GFF Format File
In geneHapR: Gene Haplotype Statistics, Phenotype Association and Visualization
import_gff R Documentation
Import Annotations from GFF Format File
Description
import genome annotations in GFF/GFF3 format
Usage
import_gff(gffFile, format = "gff")
Arguments
gffFile
the gff file path
format
should be one of "gff", "gff1", "gff2", "gff3", "gvf",
or "gtf". Default as gff
Value
GRange object
Examples
gff.Path <- system.file("extdata", "annotation.gff", package = "geneHapR")
gff <- import_gff(gff.Path, format = "gff")
gff
geneHapR documentation built on May 29, 2024, 11:59 a.m.
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| import_gff | R Documentation |
Import Annotations from GFF Format File
Description
import genome annotations in GFF/GFF3 format
Usage
import_gff(gffFile, format = "gff")
Arguments
gffFile |
the gff file path |
format |
should be one of "gff", "gff1", "gff2", "gff3", "gvf", or "gtf". Default as gff |
Value
GRange object
Examples
gff.Path <- system.file("extdata", "annotation.gff", package = "geneHapR")
gff <- import_gff(gff.Path, format = "gff")
gff
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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