expressionHist: Draw histogram with the expression values

In dupRadar: Assessment of duplication rates in RNA-Seq datasets

Description

expressionHist Draw histogram with the expression values

Usage

expressionHist(DupMat, value = "RPK", ...)

Arguments

DupMat	The duplication matrix calculated by analyzeDuprates
value	The column from the duplication matrix containing the expression values
...	Other parameters sent to hist()

Details

This function draws a histogram of the expression values from the duplication matrix calculated by analyzeDuprates.

Value

nothing

Examples

# dm is a duplication matrix calculated by analyzeDuprates:
# R> dm <- analyzeDuprates(bamDuprm,gtf,stranded,paired,threads)
attach(dupRadar_examples)

# histogram of expression values for annotation
expressionHist(DupMat=dm)

Example output

dupRadar documentation built on Nov. 8, 2020, 5:41 p.m.