pathway.visualization: pathway.visualization

In TRONCO: TRONCO, an R package for TRanslational ONCOlogy

Description

Visualise pathways informations

Usage

pathway.visualization(
  x,
  title = paste("Pathways:", paste(names(pathways), collapse = ", ", sep = "")),
  file = NA,
  pathways.color = "Set2",
  aggregate.pathways,
  pathways,
  ...
)

Arguments

x	A TRONCO complian dataset
title	Plot title
file	To generate a PDF a filename have to be given
pathways.color	A RColorBrewer color palette
aggregate.pathways	Boolean parameter
pathways	Pathways
...	Additional parameters

Value

plot information

TRONCO documentation built on Nov. 8, 2020, 5:51 p.m.