as.kfold.posterr: as.kfold.posterr

In TRONCO: TRONCO, an R package for TRanslational ONCOlogy

Description

Returns a dataframe with all the posterior classification error score in a TRONCO model. It is possible to specify a subset of events or models if multiple reconstruction have been performed.

Usage

as.kfold.posterr(
  x,
  events = as.events(x),
  models = names(x$model),
  values = FALSE,
  table = FALSE
)

Arguments

x	A TRONCO model.
events	A subset of events as of as.events(x), all by default.
models	A subset of reconstructed models, all by default.
values	If you want to see also the values
table	Keep the original table (defaul false)

Value

All the posterior classification error scores in a TRONCO model

Examples

data(test_model_kfold)
as.kfold.posterr(test_model_kfold)
as.kfold.posterr(test_model_kfold, events=as.events(test_model)[5:15,])

TRONCO documentation built on Nov. 8, 2020, 5:51 p.m.