keysToNames: keysToNames
In TRONCO: TRONCO, an R package for TRanslational ONCOlogy
Description
Usage
Arguments
Value
Examples
Description
Convert colnames/rownames of a matrix into intelligible event names, e.g., change a key G23 in 'Mutation KRAS'.
If a name is not found, the original name is left unchanged.
Usage
1
keysToNames(x, matrix)
Arguments
x
A TRONCO compliant dataset.
matrix
A matrix with colnames/rownames which represent genotypes keys.
Value
The matrix with intelligible colnames/rownames.
Examples
1
2
3
data(test_model)
adj_matrix = as.adj.matrix(test_model, events=as.events(test_model)[5:15,])$capri_bic
keysToNames(test_model, adj_matrix)
TRONCO documentation built on Nov. 8, 2020, 5:51 p.m.
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Description Usage Arguments Value Examples
Description
Convert colnames/rownames of a matrix into intelligible event names, e.g., change a key G23 in 'Mutation KRAS'. If a name is not found, the original name is left unchanged.
Usage
1 | keysToNames(x, matrix)
|
Arguments
x |
A TRONCO compliant dataset. |
matrix |
A matrix with colnames/rownames which represent genotypes keys. |
Value
The matrix with intelligible colnames/rownames.
Examples
1 2 3 | data(test_model)
adj_matrix = as.adj.matrix(test_model, events=as.events(test_model)[5:15,])$capri_bic
keysToNames(test_model, adj_matrix)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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